* Saved the original lmod_python.py and

~/.ipython/profile_default/startup/000-odurc-lmod.py
  from Wahab cluster on the "legacy" lmod-based ipython/jupyter
  session. Last update: 2020-06-09.

  Sigs:
    # -rw-r--r-- 1 wpurwant users 179 2020-06-03 15:49 000-odurc-lmod.py
    # -rw-r--r-- 1 wpurwant users 843 2020-03-17 14:02 lmod_python.py
    # 8718a2d7a7d6d152701e6c31254f7168  000-odurc-lmod.py
    # 24a740e83656875bd39f942529378414  lmod_python.py
master
Wirawan Purwanto 2 years ago
parent 9edb1e040d
commit 7c02045fa1
  1. 6
      lmod/ipython/startup/000-odurc-lmod.py.orig
  2. 26
      lmod/ipython/startup/lmod_python.py.orig

@ -0,0 +1,6 @@
try:
from lmod_python import module
except ModuleNotFoundError:
import sys
sys.path.append('/shared/apps/common/lmod/scripts/init')
from lmod_python import module

@ -0,0 +1,26 @@
# -*- python -*-
from __future__ import print_function
from subprocess import PIPE, Popen
import os, sys
sys.path.append('/shared/apps/common/lmod/current/init')
from env_modules_python import module as lmod_module
def module(command, *arguments):
lmod_module(command, *arguments)
sys.path = os.environ.get('PYTHONPATH').split(':') + sys.path
manual_ld_library_dir = os.environ.get('LMOD_MANUAL_LD_LIBRARY_PATH')
for search_path in os.getenv('LD_LIBRARY_PATH').split(':')[::-1]:
if not os.path.isdir(search_path):
continue
for f in os.listdir(search_path):
if '.so' in f:
src = f'{search_path}/{f}'
tgt = f'{manual_ld_library_dir}/{f}'
if os.path.islink(tgt):
os.unlink(tgt)
os.symlink(src, tgt)
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