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* Saved developmental notebooks to devise/test the "lmod_python_fix.py".

Browse Source 
These were done on Wahab with legacy (lmod-based) Python suite.

  Sigs:
    # -rw-r--r-- 1 wpurwant users 56588 2020-06-09 17:35 debug_ipython_start_1.ipynb
    # -rw-r--r-- 1 wpurwant users 20395 2020-06-09 17:34 debug_ipython_start_2.ipynb
    # -rw-r--r-- 1 wpurwant users 21965 2020-06-09 19:20 debug_ipython_start_3.ipynb
    # -rw-r--r-- 1 wpurwant users 10717 2020-06-09 19:23 debug_ipython_start_4_vanilla.ipynb
    # -rw-r--r-- 1 wpurwant users 37041 2020-06-09 19:59 debug_ipython_start_5.ipynb
    # b061fbc819806bc18d48287a9654bcc5  debug_ipython_start_1.ipynb
    # bc262fc0d3cd290da1f46a242a6fcccb  debug_ipython_start_2.ipynb
    # 5f289c909e967096712b3196a19979b7  debug_ipython_start_3.ipynb
    # b5f0cd9251e325b0c7e0222ba4cfc037  debug_ipython_start_4_vanilla.ipynb
    # abc440a885da0872d5bc215adfc3edd7  debug_ipython_start_5.ipynb
master
Wirawan Purwanto 2 years ago
parent 0ad73f50d6
commit 4a1b5d0a69
5 changed files with 2387 additions and 0 deletions
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  1. 751
      lmod/ipython/startup/testbeds/debug_ipython_start_1.ipynb
  2. 254
      lmod/ipython/startup/testbeds/debug_ipython_start_2.ipynb
  3. 454
      lmod/ipython/startup/testbeds/debug_ipython_start_3.ipynb
  4. 415
      lmod/ipython/startup/testbeds/debug_ipython_start_4_vanilla.ipynb
  5. 513
      lmod/ipython/startup/testbeds/debug_ipython_start_5.ipynb

751
lmod/ipython/startup/testbeds/debug_ipython_start_1.ipynb
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{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"# Examine & fix jupyter / ipython start file\n",
"\n",
"Date: 2020-06-09\n",
"\n",
"**This notebook is archived**\n",
"\n",
"Purpose: Try to test the new *my* fix to `~/.ipython/profile_default/startup/000-odurc-lmod.py` to work on both Turing & Wahab. Ran into different issue related to \"symlinking\" voodoo.\n"
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"Currently Loaded Modules:\n",
" 1) python/3.7.3 5) py-jinja2/2.10 9) py-jupyter/1.1.4\n",
" 2) py-markupsafe/1.0 6) py-six/1.12.0 10) texlive/2020\n",
" 3) py-pytz/2018.4 7) intel-mkl/2019.4.243 11) cuda/10.0.130\n",
" 4) py-babel/2.6.0 8) py-numpy/1.16.3\n",
"\n",
" \n",
"\n",
"\n"
]
}
],
"source": [
"module(\"list\")"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [
{
"ename": "NameError",
"evalue": "name 'os' is not defined",
"output_type": "error",
"traceback": [
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
"\u001b[0;31mNameError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m<ipython-input-2-15f5e96fdb7b>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mos\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
"\u001b[0;31mNameError\u001b[0m: name 'os' is not defined"
]
}
],
"source": [
"os"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"outputs": [],
"source": [
"import os"
]
},
{
"cell_type": "code",
"execution_count": 4,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/tmp/tmp.r0z2tyOgvo'"
]
},
"execution_count": 4,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"os.environ.get(\"LMOD_MANUAL_LD_LIBRARY_PATH\")"
]
},
{
"cell_type": "code",
"execution_count": 5,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n",
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"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:30 \u001b[01;36mlibOpenCL.so.1\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libOpenCL.so.1\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:30 \u001b[01;36mlibOpenCL.so.1.1\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libOpenCL.so.1.1\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:30 \u001b[01;36mlibaccinj64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libaccinj64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:30 \u001b[01;36mlibaccinj64.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libaccinj64.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 16:30 \u001b[01;36mlibaccinj64.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libaccinj64.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibcublas.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcublas.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibcublas.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcublas.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibcublas.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcublas.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibcudart.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcudart.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibcudart.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcudart.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibcudart.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcudart.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:30 \u001b[01;36mlibcufft.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufft.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:30 \u001b[01;36mlibcufft.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufft.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibcufft.so.10.0.145\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufft.so.10.0.145\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibcufftw.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufftw.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibcufftw.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufftw.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibcufftw.so.10.0.145\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufftw.so.10.0.145\r\n",
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"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:30 \u001b[01;36mlibcuinj64.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcuinj64.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:30 \u001b[01;36mlibcuinj64.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcuinj64.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibcurand.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcurand.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibcurand.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcurand.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibcurand.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcurand.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:30 \u001b[01;36mlibcusolver.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusolver.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:30 \u001b[01;36mlibcusolver.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusolver.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 16:30 \u001b[01;36mlibcusolver.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusolver.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:30 \u001b[01;36mlibcusparse.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusparse.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:30 \u001b[01;36mlibcusparse.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusparse.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 16:30 \u001b[01;36mlibcusparse.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusparse.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:30 \u001b[01;36mlibiomp5.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libiomp5.so\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:30 \u001b[01;36mlibiomp5_db.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libiomp5_db.so\r\n",
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"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:30 \u001b[01;36mlibmkl_avx2.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx2.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:30 \u001b[01;36mlibmkl_avx512.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx512.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibmkl_avx512_mic.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx512_mic.so\r\n",
"lrwxrwxrwx 1 wpurwant users 50 Jun 9 16:30 \u001b[01;36mlibmkl_blacs_intelmpi_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_intelmpi_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 49 Jun 9 16:30 \u001b[01;36mlibmkl_blacs_intelmpi_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_intelmpi_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 49 Jun 9 16:30 \u001b[01;36mlibmkl_blacs_openmpi_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_openmpi_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 48 Jun 9 16:30 \u001b[01;36mlibmkl_blacs_openmpi_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_openmpi_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 48 Jun 9 16:30 \u001b[01;36mlibmkl_blacs_sgimpt_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_sgimpt_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 47 Jun 9 16:30 \u001b[01;36mlibmkl_blacs_sgimpt_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_sgimpt_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:30 \u001b[01;36mlibmkl_cdft_core.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_cdft_core.so\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:30 \u001b[01;36mlibmkl_core.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_core.so\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:30 \u001b[01;36mlibmkl_def.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_def.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:30 \u001b[01;36mlibmkl_gf_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_gf_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibmkl_gf_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_gf_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibmkl_gnu_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_gnu_thread.so\r\n",
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"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibmkl_intel_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_intel_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:30 \u001b[01;36mlibmkl_intel_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_intel_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibmkl_mc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_mc.so\r\n",
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"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibmkl_pgi_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_pgi_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibmkl_rt.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_rt.so\r\n",
"lrwxrwxrwx 1 wpurwant users 45 Jun 9 16:30 \u001b[01;36mlibmkl_scalapack_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_scalapack_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 44 Jun 9 16:30 \u001b[01;36mlibmkl_scalapack_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_scalapack_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibmkl_sequential.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_sequential.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibmkl_tbb_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_tbb_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibmkl_vml_avx.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:30 \u001b[01;36mlibmkl_vml_avx2.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx2.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibmkl_vml_avx512.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx512.so\r\n",
"lrwxrwxrwx 1 wpurwant users 44 Jun 9 16:30 \u001b[01;36mlibmkl_vml_avx512_mic.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx512_mic.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:30 \u001b[01;36mlibmkl_vml_cmpt.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_cmpt.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibmkl_vml_def.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_def.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:30 \u001b[01;36mlibmkl_vml_mc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_mc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibmkl_vml_mc2.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_mc2.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibmkl_vml_mc3.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_mc3.so\r\n",
"lrwxrwxrwx 1 wpurwant users 30 Jun 9 16:30 \u001b[01;36mlibnppc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 35 Jun 9 16:30 \u001b[01;36mlibnppc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:30 \u001b[01;36mlibnppc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibnppial.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppial.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibnppial.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppial.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibnppial.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppial.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibnppicc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibnppicc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibnppicc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:30 \u001b[01;36mlibnppicom.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicom.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:30 \u001b[01;36mlibnppicom.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicom.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:30 \u001b[01;36mlibnppicom.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicom.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:30 \u001b[01;36mlibnppidei.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppidei.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:30 \u001b[01;36mlibnppidei.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppidei.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:30 \u001b[01;36mlibnppidei.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppidei.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:30 \u001b[01;36mlibnppif.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppif.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:30 \u001b[01;36mlibnppif.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppif.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibnppif.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppif.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:30 \u001b[01;36mlibnppig.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppig.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:30 \u001b[01;36mlibnppig.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppig.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibnppig.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppig.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:30 \u001b[01;36mlibnppim.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppim.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:30 \u001b[01;36mlibnppim.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppim.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibnppim.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppim.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibnppist.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppist.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibnppist.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppist.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibnppist.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppist.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibnppisu.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppisu.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibnppisu.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppisu.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibnppisu.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppisu.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibnppitc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppitc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibnppitc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppitc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibnppitc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppitc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 30 Jun 9 16:30 \u001b[01;36mlibnpps.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnpps.so\r\n",
"lrwxrwxrwx 1 wpurwant users 35 Jun 9 16:30 \u001b[01;36mlibnpps.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnpps.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:30 \u001b[01;36mlibnpps.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnpps.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:30 \u001b[01;36mlibnvToolsExt.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvToolsExt.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:30 \u001b[01;36mlibnvToolsExt.so.1\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvToolsExt.so.1\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:30 \u001b[01;36mlibnvToolsExt.so.1.0.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvToolsExt.so.1.0.0\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibnvblas.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvblas.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibnvblas.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvblas.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibnvblas.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvblas.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:30 \u001b[01;36mlibnvgraph.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvgraph.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:30 \u001b[01;36mlibnvgraph.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvgraph.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:30 \u001b[01;36mlibnvgraph.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvgraph.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:30 \u001b[01;36mlibnvjpeg.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvjpeg.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibnvjpeg.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvjpeg.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:30 \u001b[01;36mlibnvjpeg.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvjpeg.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibnvrtc-builtins.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc-builtins.so\r\n",
"lrwxrwxrwx 1 wpurwant users 45 Jun 9 16:30 \u001b[01;36mlibnvrtc-builtins.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc-builtins.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 49 Jun 9 16:30 \u001b[01;36mlibnvrtc-builtins.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc-builtins.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:30 \u001b[01;36mlibnvrtc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:30 \u001b[01;36mlibnvrtc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibnvrtc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:30 \u001b[01;36mlibpython3.7m.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libpython3.7m.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:30 \u001b[01;36mlibpython3.7m.so.1.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libpython3.7m.so.1.0\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:30 \u001b[01;36mlibpython3.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libpython3.so\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:30 \u001b[01;36mlibtbb.so.2\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libtbb.so.2\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:30 \u001b[01;36mlibtbbmalloc.so.2\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libtbbmalloc.so.2\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 16:30 \u001b[01;36mlibtbbmalloc_proxy.so.2\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libtbbmalloc_proxy.so.2\r\n"
]
}
],
"source": [
"ls -l /tmp/tmp.r0z2tyOgvo/"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"/shared/apps/common/python/3.7.3-wqal/bin/python\r\n"
]
}
],
"source": [
"!which python"
]
},
{
"cell_type": "code",
"execution_count": 7,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
" \u001b[0m\u001b[33mcuda-memcheck.event.19926.1\u001b[0m|\r\n",
" \u001b[33mcuda-memcheck.event.19926.2\u001b[0m|\r\n",
" mlnx_tune_200510_161626.log\r\n",
" \u001b[01;34mompi.d3-w4140b-07.454661\u001b[0m/\r\n",
" \u001b[01;34mpymp-2dws378n\u001b[0m/\r\n",
" \u001b[01;34mpymp-4vk1uyg9\u001b[0m/\r\n",
" \u001b[01;34mpymp-79ftl_9t\u001b[0m/\r\n",
" \u001b[01;34mpymp-95agc6km\u001b[0m/\r\n",
" \u001b[01;34mpymp-9d2qwhs2\u001b[0m/\r\n",
" \u001b[01;34mpymp-grgfanib\u001b[0m/\r\n",
" \u001b[01;34mpymp-uifqej6w\u001b[0m/\r\n",
" \u001b[01;34mpymp-xkhht22p\u001b[0m/\r\n",
" \u001b[01;34msystemd-private-ebe44f5838784035ba3b40331135dee1-srp_daemon.service-pBSJaZ\u001b[0m/\r\n",
"\u001b[01;34m'systemd-private-ebe44f5838784035ba3b40331135dee1-srp_daemon_port@mlx5_0:1.service-5lcpqJ'\u001b[0m\u001b[K/\r\n",
" \u001b[01;34msystemd-private-ebe44f5838784035ba3b40331135dee1-systemd-resolved.service-bcvDjh\u001b[0m\u001b[K/\r\n",
" \u001b[01;34msystemd-private-ebe44f5838784035ba3b40331135dee1-systemd-timesyncd.service-DcvPfv\u001b[0m\u001b[K/\r\n",
" \u001b[01;34mtmp.r0z2tyOgvo\u001b[0m/\r\n"
]
}
],
"source": [
"ls /tmp/"
]
},
{
"cell_type": "code",
"execution_count": 8,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"\u001b[0m\u001b[01;34mNetworkManager\u001b[0m/ ltrace.conf\r\n",
"\u001b[01;34mOpenCL\u001b[0m/ \u001b[01;34mlvm\u001b[0m/\r\n",
"\u001b[01;34mX11\u001b[0m/ machine-id\r\n",
"\u001b[01;34macpi\u001b[0m/ magic\r\n",
"adduser.conf magic.mime\r\n",
"\u001b[01;34malternatives\u001b[0m/ mailcap\r\n",
"\u001b[01;34mansible\u001b[0m/ mailcap.order\r\n",
"\u001b[01;34mapm\u001b[0m/ manpath.config\r\n",
"\u001b[01;34mapparmor\u001b[0m/ \u001b[01;34mmdadm\u001b[0m/\r\n",
"\u001b[01;34mapparmor.d\u001b[0m/ \u001b[01;34mmft\u001b[0m/\r\n",
"\u001b[01;34mapport\u001b[0m/ mime.types\r\n",
"\u001b[01;34mapt\u001b[0m/ mke2fs.conf\r\n",
"at.deny \u001b[01;34mmodprobe.d\u001b[0m/\r\n",
"bash.bashrc modules\r\n",
"bash_completion \u001b[01;34mmodules-load.d\u001b[0m/\r\n",
"\u001b[01;34mbash_completion.d\u001b[0m/ \u001b[01;36mmtab\u001b[0m@\r\n",
"bindresvport.blacklist \u001b[01;34mmunge\u001b[0m/\r\n",
"\u001b[01;34mbinfmt.d\u001b[0m/ \u001b[01;34mmysql\u001b[0m/\r\n",
"\u001b[01;34mbyobu\u001b[0m/ nanorc\r\n",
"\u001b[01;34mca-certificates\u001b[0m/ netconfig\r\n",
"ca-certificates.conf \u001b[01;34mnetplan\u001b[0m/\r\n",
"ca-certificates.conf.dpkg-old \u001b[01;34mnetwork\u001b[0m/\r\n",
"\u001b[01;34mcalendar\u001b[0m/ \u001b[01;34mnetworkd-dispatcher\u001b[0m/\r\n",
"\u001b[01;34mcloud\u001b[0m/ networks\r\n",
"cluster \u001b[01;34mnewt\u001b[0m/\r\n",
"\u001b[01;34mcollectd\u001b[0m/ nsswitch.conf\r\n",
"complete.tcsh openmpi-default-hostfile\r\n",
"\u001b[01;34mconsole-setup\u001b[0m/ openmpi-mca-params.conf\r\n",
"\u001b[01;34mcron.d\u001b[0m/ openmpi-totalview.tcl\r\n",
"\u001b[01;34mcron.daily\u001b[0m/ \u001b[01;34mopensm\u001b[0m/\r\n",
"\u001b[01;34mcron.hourly\u001b[0m/ \u001b[01;34mopt\u001b[0m/\r\n",
"\u001b[01;34mcron.monthly\u001b[0m/ \u001b[01;36mos-release\u001b[0m@\r\n",
"\u001b[01;34mcron.weekly\u001b[0m/ overlayroot.conf\r\n",
"crontab overlayroot.local.conf\r\n",
"\u001b[01;34mcryptsetup-initramfs\u001b[0m/ pam.conf\r\n",
"crypttab \u001b[01;34mpam.d\u001b[0m/\r\n",
"\u001b[01;34mcsh\u001b[0m/ passwd\r\n",
"csh.cshrc passwd-\r\n",
"csh.login \u001b[01;34mperl\u001b[0m/\r\n",
"csh.logout \u001b[01;34mpm\u001b[0m/\r\n",
"dat.conf pmix-mca-params.conf\r\n",
"\u001b[01;34mdbus-1\u001b[0m/ \u001b[01;34mpolkit-1\u001b[0m/\r\n",
"debconf.conf \u001b[01;34mpollinate\u001b[0m/\r\n",
"debfoster.conf popularity-contest.conf\r\n",
"debian_version profile\r\n",
"\u001b[01;34mdefault\u001b[0m/ \u001b[01;34mprofile.d\u001b[0m/\r\n",
"deluser.conf protocols\r\n",
"\u001b[01;34mdepmod.d\u001b[0m/ \u001b[01;34mpython\u001b[0m/\r\n",
"\u001b[01;34mdhcp\u001b[0m/ \u001b[01;34mpython2.7\u001b[0m/\r\n",
"\u001b[01;34mdib-manifests\u001b[0m/ \u001b[01;34mpython3\u001b[0m/\r\n",
"\u001b[01;34mdkms\u001b[0m/ \u001b[01;34mpython3.6\u001b[0m/\r\n",
"\u001b[01;34mdnsmasq.d\u001b[0m/ quilt.quiltrc\r\n",
"\u001b[01;34mdnsmasq.d-available\u001b[0m/ \u001b[01;34mrc0.d\u001b[0m/\r\n",
"\u001b[01;34mdpkg\u001b[0m/ \u001b[01;34mrc1.d\u001b[0m/\r\n",
"ec2_version \u001b[01;34mrc2.d\u001b[0m/\r\n",
"\u001b[01;34memacs\u001b[0m/ \u001b[01;34mrc3.d\u001b[0m/\r\n",
"environment \u001b[01;34mrc4.d\u001b[0m/\r\n",
"ethertypes \u001b[01;34mrc5.d\u001b[0m/\r\n",
"\u001b[01;34mfonts\u001b[0m/ \u001b[01;34mrc6.d\u001b[0m/\r\n",
"fstab \u001b[01;34mrcS.d\u001b[0m/\r\n",
"fuse.conf \u001b[01;34mrdma\u001b[0m/\r\n",
"gai.conf request-key.conf\r\n",
"\u001b[01;34mglvnd\u001b[0m/ \u001b[01;34mrequest-key.d\u001b[0m/\r\n",
"\u001b[01;34mgroff\u001b[0m/ \u001b[01;36mresolv.conf\u001b[0m@\r\n",
"group \u001b[01;32mrmt\u001b[0m*\r\n",
"group- rpc\r\n",
"\u001b[01;34mgrub.d\u001b[0m/ rsyslog.conf\r\n",
"gshadow \u001b[01;34mrsyslog.d\u001b[0m/\r\n",
"gshadow- screenrc\r\n",
"\u001b[01;34mgss\u001b[0m/ securetty\r\n",
"\u001b[01;34mgtk-3.0\u001b[0m/ \u001b[01;34msecurity\u001b[0m/\r\n",
"hdparm.conf \u001b[01;34mselinux\u001b[0m/\r\n",
"host.conf \u001b[01;34msensors.d\u001b[0m/\r\n",
"hostname sensors3.conf\r\n",
"hosts services\r\n",
"hosts.allow shadow\r\n",
"hosts.deny shadow-\r\n",
"idmapd.conf shells\r\n",
"\u001b[01;34minfiniband\u001b[0m/ \u001b[01;34mskel\u001b[0m/\r\n",
"\u001b[01;34minfiniband-diags\u001b[0m/ sos.conf\r\n",
"\u001b[01;34minit\u001b[0m/ srp_daemon.conf\r\n",
"\u001b[01;34minit.d\u001b[0m/ \u001b[01;34mssh\u001b[0m/\r\n",
"\u001b[01;34minitramfs-tools\u001b[0m/ \u001b[01;34mssl\u001b[0m/\r\n",
"inputrc \u001b[01;34msssd\u001b[0m/\r\n",
"\u001b[01;34minsserv.conf.d\u001b[0m/ subgid\r\n",
"\u001b[01;34miproute2\u001b[0m/ subgid-\r\n",
"\u001b[01;34miscsi\u001b[0m/ subuid\r\n",
"issue subuid-\r\n",
"issue.net sudoers\r\n",
"\u001b[01;34mkernel\u001b[0m/ \u001b[01;34msudoers.d\u001b[0m/\r\n",
"kernel-img.conf sysctl.conf\r\n",
"\u001b[01;34mlandscape\u001b[0m/ \u001b[01;34msysctl.d\u001b[0m/\r\n",
"ld.so.cache \u001b[01;34msystemd\u001b[0m/\r\n",
"ld.so.conf \u001b[01;34mterminfo\u001b[0m/\r\n",
"\u001b[01;34mld.so.conf.d\u001b[0m/ timezone\r\n",
"\u001b[01;34mldap\u001b[0m/ \u001b[01;34mtmpfiles.d\u001b[0m/\r\n",
"legal ucf.conf\r\n",
"libaudit.conf \u001b[01;34mudev\u001b[0m/\r\n",
"\u001b[01;34mlibibverbs.d\u001b[0m/ \u001b[01;34mufw\u001b[0m/\r\n",
"\u001b[01;34mlibnl-3\u001b[0m/ \u001b[01;34mupdate-manager\u001b[0m/\r\n",
"lnet.conf \u001b[01;34mupdate-motd.d\u001b[0m/\r\n",
"lnet_routes.conf \u001b[01;34mupdate-notifier\u001b[0m/\r\n",
"locale.alias updatedb.conf\r\n",
"locale.gen \u001b[01;34mvim\u001b[0m/\r\n",
"\u001b[01;36mlocaltime\u001b[0m@ \u001b[01;34mvmware-tools\u001b[0m/\r\n",
"\u001b[01;34mlogcheck\u001b[0m/ \u001b[01;36mvtrgb\u001b[0m@\r\n",
"login.defs wgetrc\r\n",
"logrotate.conf \u001b[01;34mxdg\u001b[0m/\r\n",
"\u001b[01;34mlogrotate.d\u001b[0m/ zsh_command_not_found\r\n",
"lsb-release\r\n"
]
}
],
"source": [
"ls /etc/"
]
},
{
"cell_type": "code",
"execution_count": 9,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/tmp/tmp.r0z2tyOgvo:/shared/apps/common/cuda/10.0.130-s6er/lib64:/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib:/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib:/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/lib:/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib:/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib:/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib:/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib:/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib:/shared/apps/common/python/3.7.3-wqal/lib'"
]
},
"execution_count": 9,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"os.environ['LD_LIBRARY_PATH']"
]
},
{
"cell_type": "code",
"execution_count": 10,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"Currently Loaded Modules:\n",
" 1) python/3.7.3 5) py-jinja2/2.10 9) py-jupyter/1.1.4\n",
" 2) py-markupsafe/1.0 6) py-six/1.12.0 10) texlive/2020\n",
" 3) py-pytz/2018.4 7) intel-mkl/2019.4.243 11) cuda/10.0.130\n",
" 4) py-babel/2.6.0 8) py-numpy/1.16.3\n",
"\n",
" \n",
"\n",
"\n"
]
}
],
"source": [
"module(\"list\")"
]
},
{
"cell_type": "code",
"execution_count": 12,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"The following have been reloaded with a version change:\n",
" 1) py-pytz/2018.4 => py-pytz/2019.3\n",
"\n",
"\n"
]
}
],
"source": [
"module(\"load\", \"py-pandas\")"
]
},
{
"cell_type": "code",
"execution_count": 13,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/shared/apps/auto/py-pandas/0.25.1-gcc-7.3.0-wzvo/lib:/shared/apps/auto/py-bottleneck/1.2.1-gcc-7.3.0-ll6r/lib:/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib:/shared/apps/auto/py-numexpr/2.7.0-gcc-7.3.0-n2j5/lib:/shared/apps/auto/py-pytz/2019.3-gcc-7.3.0-hfjj/lib:/shared/apps/auto/py-python-dateutil/2.8.0-gcc-7.3.0-rskl/lib:/tmp/tmp.r0z2tyOgvo:/shared/apps/common/cuda/10.0.130-s6er/lib64:/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib:/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/lib:/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib:/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib:/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib:/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib:/shared/apps/common/python/3.7.3-wqal/lib'"
]
},
"execution_count": 13,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"os.environ['LD_LIBRARY_PATH']"
]
},
{
"cell_type": "code",
"execution_count": 14,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
" \u001b[0m\u001b[01;36m0-demo-ondemand\u001b[0m@ \u001b[01;34mPublic\u001b[0m/ \u001b[01;34mintel\u001b[0m/\r\n",
" \u001b[01;36mBUILD\u001b[0m@ \u001b[01;34mR\u001b[0m/ \u001b[01;34mintro-to-HPC\u001b[0m/\r\n",
" \u001b[01;34mCItraining\u001b[0m/ \u001b[01;34mTemplates\u001b[0m/ \u001b[01;34mlocal\u001b[0m/\r\n",
" \u001b[01;34mCLC_Data\u001b[0m/ \u001b[01;34mTestbeds\u001b[0m/ \u001b[01;34mondemand\u001b[0m/\r\n",
" \u001b[01;34mCodes\u001b[0m/ \u001b[01;34mVideos\u001b[0m/ \u001b[01;34mperl5\u001b[0m/\r\n",
" \u001b[01;34mConsult\u001b[0m/ \u001b[01;34mWP-hpc-samples\u001b[0m/ \u001b[01;34msasuser.v93\u001b[0m/\r\n",
" \u001b[01;34mDeapSECURE\u001b[0m/ \u001b[01;34mWP-hpc-tools\u001b[0m/ \u001b[01;34msasuser.v94\u001b[0m/\r\n",
" \u001b[01;34mDesktop\u001b[0m/ \u001b[01;34m'Wolfram Mathematica'\u001b[0m/ \u001b[01;34mscripts\u001b[0m/\r\n",
" \u001b[01;34mDocuments\u001b[0m/ \u001b[01;34madmin\u001b[0m/ \u001b[01;34mseaborn-data\u001b[0m/\r\n",
" \u001b[01;34mDownloads\u001b[0m/ \u001b[01;34mbin\u001b[0m/ \u001b[37;44mthinclient_drives\u001b[0m/\r\n",
" \u001b[01;34mGAFQMC\u001b[0m/ \u001b[01;34mdata-shell\u001b[0m/ \u001b[01;34mtmp\u001b[0m/\r\n",
" \u001b[01;34mHPC\u001b[0m/ \u001b[01;34mdoc\u001b[0m/ \u001b[01;34mtrainings\u001b[0m/\r\n",
" \u001b[01;34mL\u001b[0m/ \u001b[01;34menvs\u001b[0m/ \u001b[01;32mturing_acct_pandas.py\u001b[0m*\r\n",
" \u001b[01;34mMusic\u001b[0m/ \u001b[01;34mhpc-analytics-1\u001b[0m/ \u001b[01;32mwgo-000\u001b[0m*\r\n",
" \u001b[01;32mOCR-Run01.job\u001b[0m* \u001b[01;34mhpc-analytics-2\u001b[0m/ \u001b[01;32mwgo-001\u001b[0m*\r\n",
" \u001b[01;34mPictures\u001b[0m/ \u001b[01;34mhpc-explore\u001b[0m/ \u001b[01;34mxfer\u001b[0m/\r\n"
]
}
],
"source": [
"ls ~/"
]
},
{
"cell_type": "code",
"execution_count": 25,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"/home/wpurwant/Testbeds/DeapSECURE/deapsecure-mod03-ml-devel/datasets/Drones\n"
]
}
],
"source": [
"cd ~/DeapSECURE/devel/deapsecure-mod03-ml-devel/datasets/Drones/"
]
},
{
"cell_type": "code",
"execution_count": 26,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"machinelearning_stdev.csv machinelearningdata.csv\r\n"
]
}
],
"source": [
"ls"
]
},
{
"cell_type": "code",
"execution_count": 27,
"metadata": {},
"outputs": [],
"source": [
"import pandas"
]
},
{
"cell_type": "code",
"execution_count": 29,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[0m\u001b[01;36mlibOpenCL.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libOpenCL.so\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:51 \u001b[01;36mlibOpenCL.so.1\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libOpenCL.so.1\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibOpenCL.so.1.1\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libOpenCL.so.1.1\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:51 \u001b[01;36mlibaccinj64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libaccinj64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:51 \u001b[01;36mlibaccinj64.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libaccinj64.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 16:51 \u001b[01;36mlibaccinj64.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libaccinj64.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibcublas.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcublas.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibcublas.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcublas.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibcublas.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcublas.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibcudart.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcudart.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibcudart.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcudart.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibcudart.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcudart.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:51 \u001b[01;36mlibcufft.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufft.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibcufft.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufft.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibcufft.so.10.0.145\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufft.so.10.0.145\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibcufftw.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufftw.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibcufftw.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufftw.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibcufftw.so.10.0.145\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufftw.so.10.0.145\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:51 \u001b[01;36mlibcuinj64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcuinj64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:51 \u001b[01;36mlibcuinj64.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcuinj64.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:51 \u001b[01;36mlibcuinj64.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcuinj64.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibcurand.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcurand.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibcurand.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcurand.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibcurand.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcurand.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:51 \u001b[01;36mlibcusolver.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusolver.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:51 \u001b[01;36mlibcusolver.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusolver.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 16:51 \u001b[01;36mlibcusolver.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusolver.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:51 \u001b[01;36mlibcusparse.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusparse.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:51 \u001b[01;36mlibcusparse.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusparse.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 16:51 \u001b[01;36mlibcusparse.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusparse.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:51 \u001b[01;36mlibiomp5.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libiomp5.so\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:51 \u001b[01;36mlibiomp5_db.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libiomp5_db.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibiompstubs5.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libiompstubs5.so\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:51 \u001b[01;36mlibmkl_avx.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx.so\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:51 \u001b[01;36mlibmkl_avx2.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx2.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibmkl_avx512.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx512.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibmkl_avx512_mic.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx512_mic.so\r\n",
"lrwxrwxrwx 1 wpurwant users 50 Jun 9 16:51 \u001b[01;36mlibmkl_blacs_intelmpi_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_intelmpi_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 49 Jun 9 16:51 \u001b[01;36mlibmkl_blacs_intelmpi_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_intelmpi_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 49 Jun 9 16:51 \u001b[01;36mlibmkl_blacs_openmpi_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_openmpi_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 48 Jun 9 16:51 \u001b[01;36mlibmkl_blacs_openmpi_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_openmpi_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 48 Jun 9 16:51 \u001b[01;36mlibmkl_blacs_sgimpt_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_sgimpt_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 47 Jun 9 16:51 \u001b[01;36mlibmkl_blacs_sgimpt_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_sgimpt_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:51 \u001b[01;36mlibmkl_cdft_core.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_cdft_core.so\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 16:51 \u001b[01;36mlibmkl_core.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_core.so\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:51 \u001b[01;36mlibmkl_def.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_def.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:51 \u001b[01;36mlibmkl_gf_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_gf_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibmkl_gf_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_gf_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibmkl_gnu_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_gnu_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibmkl_intel_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_intel_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibmkl_intel_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_intel_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:51 \u001b[01;36mlibmkl_intel_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_intel_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibmkl_mc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_mc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:51 \u001b[01;36mlibmkl_mc3.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_mc3.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibmkl_pgi_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_pgi_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibmkl_rt.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_rt.so\r\n",
"lrwxrwxrwx 1 wpurwant users 45 Jun 9 16:51 \u001b[01;36mlibmkl_scalapack_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_scalapack_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 44 Jun 9 16:51 \u001b[01;36mlibmkl_scalapack_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_scalapack_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibmkl_sequential.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_sequential.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibmkl_tbb_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_tbb_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibmkl_vml_avx.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:51 \u001b[01;36mlibmkl_vml_avx2.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx2.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibmkl_vml_avx512.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx512.so\r\n",
"lrwxrwxrwx 1 wpurwant users 44 Jun 9 16:51 \u001b[01;36mlibmkl_vml_avx512_mic.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx512_mic.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:51 \u001b[01;36mlibmkl_vml_cmpt.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_cmpt.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibmkl_vml_def.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_def.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibmkl_vml_mc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_mc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibmkl_vml_mc2.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_mc2.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibmkl_vml_mc3.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_mc3.so\r\n",
"lrwxrwxrwx 1 wpurwant users 30 Jun 9 16:51 \u001b[01;36mlibnppc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 35 Jun 9 16:51 \u001b[01;36mlibnppc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:51 \u001b[01;36mlibnppc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibnppial.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppial.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibnppial.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppial.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibnppial.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppial.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibnppicc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibnppicc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibnppicc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:51 \u001b[01;36mlibnppicom.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicom.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:51 \u001b[01;36mlibnppicom.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicom.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:51 \u001b[01;36mlibnppicom.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicom.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:51 \u001b[01;36mlibnppidei.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppidei.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:51 \u001b[01;36mlibnppidei.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppidei.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:51 \u001b[01;36mlibnppidei.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppidei.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:51 \u001b[01;36mlibnppif.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppif.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibnppif.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppif.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibnppif.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppif.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:51 \u001b[01;36mlibnppig.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppig.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibnppig.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppig.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibnppig.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppig.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:51 \u001b[01;36mlibnppim.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppim.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibnppim.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppim.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibnppim.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppim.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibnppist.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppist.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibnppist.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppist.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibnppist.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppist.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibnppisu.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppisu.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibnppisu.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppisu.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibnppisu.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppisu.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibnppitc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppitc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibnppitc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppitc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibnppitc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppitc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 30 Jun 9 16:51 \u001b[01;36mlibnpps.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnpps.so\r\n",
"lrwxrwxrwx 1 wpurwant users 35 Jun 9 16:51 \u001b[01;36mlibnpps.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnpps.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 16:51 \u001b[01;36mlibnpps.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnpps.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibnvToolsExt.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvToolsExt.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:51 \u001b[01;36mlibnvToolsExt.so.1\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvToolsExt.so.1\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:51 \u001b[01;36mlibnvToolsExt.so.1.0.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvToolsExt.so.1.0.0\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibnvblas.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvblas.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibnvblas.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvblas.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibnvblas.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvblas.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:51 \u001b[01;36mlibnvgraph.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvgraph.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 16:51 \u001b[01;36mlibnvgraph.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvgraph.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 16:51 \u001b[01;36mlibnvgraph.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvgraph.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 16:51 \u001b[01;36mlibnvjpeg.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvjpeg.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibnvjpeg.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvjpeg.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 16:51 \u001b[01;36mlibnvjpeg.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvjpeg.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibnvrtc-builtins.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc-builtins.so\r\n",
"lrwxrwxrwx 1 wpurwant users 45 Jun 9 16:51 \u001b[01;36mlibnvrtc-builtins.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc-builtins.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 49 Jun 9 16:51 \u001b[01;36mlibnvrtc-builtins.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc-builtins.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:51 \u001b[01;36mlibnvrtc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibnvrtc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibnvrtc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 16:51 \u001b[01;36mlibpython3.7m.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libpython3.7m.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 16:51 \u001b[01;36mlibpython3.7m.so.1.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libpython3.7m.so.1.0\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 16:51 \u001b[01;36mlibpython3.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libpython3.so\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 16:51 \u001b[01;36mlibtbb.so.2\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libtbb.so.2\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 16:51 \u001b[01;36mlibtbbmalloc.so.2\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libtbbmalloc.so.2\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 16:51 \u001b[01;36mlibtbbmalloc_proxy.so.2\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libtbbmalloc_proxy.so.2\r\n"
]
}
],
"source": [
"ls -l /tmp/tmp.r0z2tyOgvo/"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.7.3"
}
},
"nbformat": 4,
"nbformat_minor": 2
}

254
lmod/ipython/startup/testbeds/debug_ipython_start_2.ipynb
Unescape View File

@ -0,0 +1,254 @@
{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"# Examine & fix jupyter / ipython start file\n",
"\n",
"Date: 2020-06-09\n",
"\n",
"Purpose: Try to examine the outcome of *my* fix to `~/.ipython/profile_default/startup/000-odurc-lmod.py` + the handmade \"module\" command (mine: `lmod_python_fix1.py`).\n"
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"Currently Loaded Modules:\n",
" 1) python/3.7.3 5) py-jinja2/2.10 9) py-jupyter/1.1.4\n",
" 2) py-markupsafe/1.0 6) py-six/1.12.0 10) texlive/2020\n",
" 3) py-pytz/2018.4 7) intel-mkl/2019.4.243 11) cuda/10.0.130\n",
" 4) py-babel/2.6.0 8) py-numpy/1.16.3\n",
"\n",
" \n",
"\n",
"\n"
]
}
],
"source": [
"module(\"list\")"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [],
"source": [
"import os"
]
},
{
"cell_type": "code",
"execution_count": 5,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/tmp/tmp.r0z2tyOgvo'"
]
},
"execution_count": 5,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"xlibpath = os.environ.get(\"LMOD_MANUAL_LD_LIBRARY_PATH\")\n",
"xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 8,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[0m\u001b[01;36mlibOpenCL.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libOpenCL.so\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 17:28 \u001b[01;36mlibOpenCL.so.1\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libOpenCL.so.1\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibOpenCL.so.1.1\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libOpenCL.so.1.1\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 17:28 \u001b[01;36mlibaccinj64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libaccinj64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 17:28 \u001b[01;36mlibaccinj64.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libaccinj64.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 17:28 \u001b[01;36mlibaccinj64.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libaccinj64.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibcublas.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcublas.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibcublas.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcublas.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibcublas.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcublas.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibcudart.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcudart.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibcudart.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcudart.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibcudart.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcudart.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 17:28 \u001b[01;36mlibcufft.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufft.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibcufft.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufft.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibcufft.so.10.0.145\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufft.so.10.0.145\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibcufftw.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufftw.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibcufftw.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufftw.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibcufftw.so.10.0.145\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcufftw.so.10.0.145\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 17:28 \u001b[01;36mlibcuinj64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcuinj64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 17:28 \u001b[01;36mlibcuinj64.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcuinj64.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 17:28 \u001b[01;36mlibcuinj64.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcuinj64.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibcurand.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcurand.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibcurand.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcurand.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibcurand.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcurand.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 17:28 \u001b[01;36mlibcusolver.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusolver.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 17:28 \u001b[01;36mlibcusolver.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusolver.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 17:28 \u001b[01;36mlibcusolver.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusolver.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 17:28 \u001b[01;36mlibcusparse.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusparse.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 17:28 \u001b[01;36mlibcusparse.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusparse.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 17:28 \u001b[01;36mlibcusparse.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libcusparse.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 17:28 \u001b[01;36mlibiomp5.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libiomp5.so\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 17:28 \u001b[01;36mlibiomp5_db.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libiomp5_db.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibiompstubs5.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libiompstubs5.so\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 17:28 \u001b[01;36mlibmkl_avx.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx.so\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 17:28 \u001b[01;36mlibmkl_avx2.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx2.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibmkl_avx512.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx512.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibmkl_avx512_mic.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_avx512_mic.so\r\n",
"lrwxrwxrwx 1 wpurwant users 50 Jun 9 17:28 \u001b[01;36mlibmkl_blacs_intelmpi_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_intelmpi_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 49 Jun 9 17:28 \u001b[01;36mlibmkl_blacs_intelmpi_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_intelmpi_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 49 Jun 9 17:28 \u001b[01;36mlibmkl_blacs_openmpi_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_openmpi_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 48 Jun 9 17:28 \u001b[01;36mlibmkl_blacs_openmpi_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_openmpi_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 48 Jun 9 17:28 \u001b[01;36mlibmkl_blacs_sgimpt_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_sgimpt_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 47 Jun 9 17:28 \u001b[01;36mlibmkl_blacs_sgimpt_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_blacs_sgimpt_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 17:28 \u001b[01;36mlibmkl_cdft_core.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_cdft_core.so\r\n",
"lrwxrwxrwx 1 wpurwant users 34 Jun 9 17:28 \u001b[01;36mlibmkl_core.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_core.so\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 17:28 \u001b[01;36mlibmkl_def.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_def.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 17:28 \u001b[01;36mlibmkl_gf_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_gf_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibmkl_gf_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_gf_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibmkl_gnu_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_gnu_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibmkl_intel_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_intel_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibmkl_intel_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_intel_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 17:28 \u001b[01;36mlibmkl_intel_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_intel_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibmkl_mc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_mc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 17:28 \u001b[01;36mlibmkl_mc3.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_mc3.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibmkl_pgi_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_pgi_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibmkl_rt.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_rt.so\r\n",
"lrwxrwxrwx 1 wpurwant users 45 Jun 9 17:28 \u001b[01;36mlibmkl_scalapack_ilp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_scalapack_ilp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 44 Jun 9 17:28 \u001b[01;36mlibmkl_scalapack_lp64.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_scalapack_lp64.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibmkl_sequential.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_sequential.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibmkl_tbb_thread.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_tbb_thread.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibmkl_vml_avx.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 17:28 \u001b[01;36mlibmkl_vml_avx2.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx2.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibmkl_vml_avx512.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx512.so\r\n",
"lrwxrwxrwx 1 wpurwant users 44 Jun 9 17:28 \u001b[01;36mlibmkl_vml_avx512_mic.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_avx512_mic.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 17:28 \u001b[01;36mlibmkl_vml_cmpt.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_cmpt.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibmkl_vml_def.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_def.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibmkl_vml_mc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_mc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibmkl_vml_mc2.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_mc2.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibmkl_vml_mc3.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libmkl_vml_mc3.so\r\n",
"lrwxrwxrwx 1 wpurwant users 30 Jun 9 17:28 \u001b[01;36mlibnppc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 35 Jun 9 17:28 \u001b[01;36mlibnppc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 17:28 \u001b[01;36mlibnppc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibnppial.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppial.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibnppial.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppial.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibnppial.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppial.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibnppicc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibnppicc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibnppicc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 17:28 \u001b[01;36mlibnppicom.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicom.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 17:28 \u001b[01;36mlibnppicom.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicom.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 17:28 \u001b[01;36mlibnppicom.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppicom.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 17:28 \u001b[01;36mlibnppidei.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppidei.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 17:28 \u001b[01;36mlibnppidei.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppidei.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 17:28 \u001b[01;36mlibnppidei.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppidei.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 17:28 \u001b[01;36mlibnppif.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppif.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibnppif.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppif.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibnppif.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppif.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 17:28 \u001b[01;36mlibnppig.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppig.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibnppig.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppig.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibnppig.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppig.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 17:28 \u001b[01;36mlibnppim.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppim.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibnppim.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppim.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibnppim.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppim.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibnppist.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppist.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibnppist.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppist.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibnppist.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppist.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibnppisu.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppisu.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibnppisu.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppisu.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibnppisu.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppisu.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibnppitc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppitc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibnppitc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppitc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibnppitc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnppitc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 30 Jun 9 17:28 \u001b[01;36mlibnpps.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnpps.so\r\n",
"lrwxrwxrwx 1 wpurwant users 35 Jun 9 17:28 \u001b[01;36mlibnpps.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnpps.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 39 Jun 9 17:28 \u001b[01;36mlibnpps.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnpps.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibnvToolsExt.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvToolsExt.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 17:28 \u001b[01;36mlibnvToolsExt.so.1\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvToolsExt.so.1\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 17:28 \u001b[01;36mlibnvToolsExt.so.1.0.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvToolsExt.so.1.0.0\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibnvblas.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvblas.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibnvblas.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvblas.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibnvblas.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvblas.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 17:28 \u001b[01;36mlibnvgraph.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvgraph.so\r\n",
"lrwxrwxrwx 1 wpurwant users 38 Jun 9 17:28 \u001b[01;36mlibnvgraph.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvgraph.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 42 Jun 9 17:28 \u001b[01;36mlibnvgraph.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvgraph.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 32 Jun 9 17:28 \u001b[01;36mlibnvjpeg.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvjpeg.so\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibnvjpeg.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvjpeg.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 41 Jun 9 17:28 \u001b[01;36mlibnvjpeg.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvjpeg.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibnvrtc-builtins.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc-builtins.so\r\n",
"lrwxrwxrwx 1 wpurwant users 45 Jun 9 17:28 \u001b[01;36mlibnvrtc-builtins.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc-builtins.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 49 Jun 9 17:28 \u001b[01;36mlibnvrtc-builtins.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc-builtins.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 17:28 \u001b[01;36mlibnvrtc.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc.so\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibnvrtc.so.10.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc.so.10.0\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibnvrtc.so.10.0.130\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libnvrtc.so.10.0.130\r\n",
"lrwxrwxrwx 1 wpurwant users 36 Jun 9 17:28 \u001b[01;36mlibpython3.7m.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libpython3.7m.so\r\n",
"lrwxrwxrwx 1 wpurwant users 40 Jun 9 17:28 \u001b[01;36mlibpython3.7m.so.1.0\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libpython3.7m.so.1.0\r\n",
"lrwxrwxrwx 1 wpurwant users 33 Jun 9 17:28 \u001b[01;36mlibpython3.so\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libpython3.so\r\n",
"lrwxrwxrwx 1 wpurwant users 31 Jun 9 17:28 \u001b[01;36mlibtbb.so.2\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libtbb.so.2\r\n",
"lrwxrwxrwx 1 wpurwant users 37 Jun 9 17:28 \u001b[01;36mlibtbbmalloc.so.2\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libtbbmalloc.so.2\r\n",
"lrwxrwxrwx 1 wpurwant users 43 Jun 9 17:28 \u001b[01;36mlibtbbmalloc_proxy.so.2\u001b[0m -> /tmp/tmp.r0z2tyOgvo/libtbbmalloc_proxy.so.2\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 9,
"metadata": {},
"outputs": [],
"source": [
"module??"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.7.3"
}
},
"nbformat": 4,
"nbformat_minor": 2
}

454
lmod/ipython/startup/testbeds/debug_ipython_start_3.ipynb
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@ -0,0 +1,454 @@
{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"# Examine & fix jupyter / ipython start file\n",
"\n",
"Date: 2020-06-09\n",
"\n",
"Purpose: Try to examine the outcome of *my* fix to `~/.ipython/profile_default/startup/000-odurc-lmod.py` + the handmade \"module\" command (mine: `lmod_python_fix1.py`).\n",
"\n",
"Test-3: restarted the entire Jupyter stuff.\n"
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"<function env_modules_python.module(command, *arguments)>"
]
},
"execution_count": 1,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"module"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/shared/apps/common/lmod/current/init/env_modules_python.py'"
]
},
"execution_count": 2,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"module.__code__.co_filename"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"outputs": [],
"source": [
"module??"
]
},
{
"cell_type": "code",
"execution_count": 4,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/tmp/tmp.JtRbow9G3w'"
]
},
"execution_count": 4,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"import os\n",
"\n",
"xlibpath = os.environ.get(\"LMOD_MANUAL_LD_LIBRARY_PATH\")\n",
"xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/scripts/init',\n",
" '',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python37.zip',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/lib-dynload',\n",
" '/home/wpurwant/.local/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages/IPython/extensions',\n",
" '/home/wpurwant/.ipython',\n",
" '/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/current/init']"
]
},
"execution_count": 6,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"import sys\n",
"sys.path"
]
},
{
"cell_type": "code",
"execution_count": 7,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['/shared/apps/common/lmod/scripts/init',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages']"
]
},
"execution_count": 7,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"os.environ['PYTHONPATH'].split(\":\")"
]
},
{
"cell_type": "code",
"execution_count": 9,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 10,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"Currently Loaded Modules:\n",
" 1) python/3.7.3 5) py-jinja2/2.10 9) py-jupyter/1.1.4\n",
" 2) py-markupsafe/1.0 6) py-six/1.12.0 10) texlive/2020\n",
" 3) py-pytz/2018.4 7) intel-mkl/2019.4.243\n",
" 4) py-babel/2.6.0 8) py-numpy/1.16.3\n",
"\n",
" \n",
"\n",
"\n"
]
}
],
"source": [
"module(\"list\")"
]
},
{
"cell_type": "code",
"execution_count": 11,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 12,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/scripts/init',\n",
" '',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python37.zip',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/lib-dynload',\n",
" '/home/wpurwant/.local/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages/IPython/extensions',\n",
" '/home/wpurwant/.ipython',\n",
" '/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/current/init']"
]
},
"execution_count": 12,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"import sys\n",
"sys.path"
]
},
{
"cell_type": "code",
"execution_count": 13,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 14,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"<function env_modules_python.module(command, *arguments)>"
]
},
"execution_count": 14,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"module"
]
},
{
"cell_type": "code",
"execution_count": 15,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"Currently Loaded Modules:\n",
" 1) python/3.7.3 5) py-jinja2/2.10 9) py-jupyter/1.1.4\n",
" 2) py-markupsafe/1.0 6) py-six/1.12.0 10) texlive/2020\n",
" 3) py-pytz/2018.4 7) intel-mkl/2019.4.243\n",
" 4) py-babel/2.6.0 8) py-numpy/1.16.3\n",
"\n",
" \n",
"\n",
"\n"
]
}
],
"source": [
"module(\"list\")"
]
},
{
"cell_type": "code",
"execution_count": 16,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 17,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"The following have been reloaded with a version change:\n",
" 1) py-pytz/2018.4 => py-pytz/2019.3\n",
"\n",
"\n"
]
}
],
"source": [
"module(\"load\", \"py-pandas\")"
]
},
{
"cell_type": "code",
"execution_count": 11,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 172\r\n",
"lrwxrwxrwx 1 wpurwant users 131 Jun 9 19:04 \u001b[0m\u001b[01;36mlibiomp5.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin/libiomp5.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 134 Jun 9 19:04 \u001b[01;36mlibiomp5_db.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin/libiomp5_db.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 136 Jun 9 19:04 \u001b[01;36mlibiompstubs5.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin/libiompstubs5.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 128 Jun 9 19:04 \u001b[01;36mlibmkl_avx.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 129 Jun 9 19:04 \u001b[01;36mlibmkl_avx2.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx2.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 131 Jun 9 19:04 \u001b[01;36mlibmkl_avx512.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx512.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_avx512_mic.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx512_mic.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 145 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_intelmpi_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_intelmpi_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 144 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_intelmpi_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_intelmpi_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 144 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_openmpi_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_openmpi_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 143 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_openmpi_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_openmpi_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 143 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_sgimpt_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_sgimpt_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 142 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_sgimpt_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_sgimpt_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 134 Jun 9 19:04 \u001b[01;36mlibmkl_cdft_core.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_cdft_core.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 129 Jun 9 19:04 \u001b[01;36mlibmkl_core.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_core.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 128 Jun 9 19:04 \u001b[01;36mlibmkl_def.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_def.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:04 \u001b[01;36mlibmkl_gf_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_gf_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:04 \u001b[01;36mlibmkl_gf_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_gnu_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_gnu_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 136 Jun 9 19:04 \u001b[01;36mlibmkl_intel_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_intel_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_intel_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_intel_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 137 Jun 9 19:04 \u001b[01;36mlibmkl_intel_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_intel_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 127 Jun 9 19:04 \u001b[01;36mlibmkl_mc.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_mc.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 128 Jun 9 19:04 \u001b[01;36mlibmkl_mc3.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_mc3.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_pgi_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_pgi_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 127 Jun 9 19:04 \u001b[01;36mlibmkl_rt.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_rt.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 140 Jun 9 19:04 \u001b[01;36mlibmkl_scalapack_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_scalapack_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 139 Jun 9 19:04 \u001b[01;36mlibmkl_scalapack_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_scalapack_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_sequential.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_sequential.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_tbb_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_tbb_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:04 \u001b[01;36mlibmkl_vml_avx.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:04 \u001b[01;36mlibmkl_vml_avx2.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx2.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_vml_avx512.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx512.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 139 Jun 9 19:04 \u001b[01;36mlibmkl_vml_avx512_mic.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx512_mic.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:04 \u001b[01;36mlibmkl_vml_cmpt.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_cmpt.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:04 \u001b[01;36mlibmkl_vml_def.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_def.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 131 Jun 9 19:04 \u001b[01;36mlibmkl_vml_mc.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_mc.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:04 \u001b[01;36mlibmkl_vml_mc2.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_mc2.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:04 \u001b[01;36mlibmkl_vml_mc3.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_mc3.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 58 Jun 9 19:04 \u001b[01;36mlibpython3.7m.so\u001b[0m -> \u001b[01;32m/shared/apps/common/python/3.7.3-wqal/lib/libpython3.7m.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 62 Jun 9 19:04 \u001b[01;36mlibpython3.7m.so.1.0\u001b[0m -> \u001b[01;32m/shared/apps/common/python/3.7.3-wqal/lib/libpython3.7m.so.1.0\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 55 Jun 9 19:04 \u001b[01;36mlibpython3.so\u001b[0m -> \u001b[01;32m/shared/apps/common/python/3.7.3-wqal/lib/libpython3.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:04 \u001b[01;36mlibtbb.so.2\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7/libtbb.so.2\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 139 Jun 9 19:04 \u001b[01;36mlibtbbmalloc.so.2\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7/libtbbmalloc.so.2\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 145 Jun 9 19:04 \u001b[01;36mlibtbbmalloc_proxy.so.2\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7/libtbbmalloc_proxy.so.2\u001b[0m\u001b[K*\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [],
"source": [
"import numpy"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.7.3"
}
},
"nbformat": 4,
"nbformat_minor": 2
}

415
lmod/ipython/startup/testbeds/debug_ipython_start_4_vanilla.ipynb
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{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"# Examine & fix jupyter / ipython start file\n",
"\n",
"Date: 2020-06-09\n",
"\n",
"Purpose: Try to examine the outcome of *my* fix to `~/.ipython/profile_default/startup/000-odurc-lmod.py` + the handmade \"module\" command (mine: `lmod_python_fix1.py`).\n",
"\n",
"Test-4: this is what happens if we revert to \"vanilla\" module command without changing sys.path.\n"
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"<function env_modules_python.module(command, *arguments)>"
]
},
"execution_count": 1,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"module"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/shared/apps/common/lmod/current/init/env_modules_python.py'"
]
},
"execution_count": 2,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"module.__code__.co_filename"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"outputs": [],
"source": [
"module??"
]
},
{
"cell_type": "code",
"execution_count": 4,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/tmp/tmp.JtRbow9G3w'"
]
},
"execution_count": 4,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"import os\n",
"\n",
"xlibpath = os.environ.get(\"LMOD_MANUAL_LD_LIBRARY_PATH\")\n",
"xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/scripts/init',\n",
" '',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python37.zip',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/lib-dynload',\n",
" '/home/wpurwant/.local/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages/IPython/extensions',\n",
" '/home/wpurwant/.ipython',\n",
" '/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/current/init']"
]
},
"execution_count": 6,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"import sys\n",
"sys.path"
]
},
{
"cell_type": "code",
"execution_count": 7,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['/shared/apps/common/lmod/scripts/init',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages']"
]
},
"execution_count": 7,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"os.environ['PYTHONPATH'].split(\":\")"
]
},
{
"cell_type": "code",
"execution_count": 9,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 10,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"Currently Loaded Modules:\n",
" 1) python/3.7.3 5) py-jinja2/2.10 9) py-jupyter/1.1.4\n",
" 2) py-markupsafe/1.0 6) py-six/1.12.0 10) texlive/2020\n",
" 3) py-pytz/2018.4 7) intel-mkl/2019.4.243\n",
" 4) py-babel/2.6.0 8) py-numpy/1.16.3\n",
"\n",
" \n",
"\n",
"\n"
]
}
],
"source": [
"module(\"list\")"
]
},
{
"cell_type": "code",
"execution_count": 11,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 12,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/scripts/init',\n",
" '',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python37.zip',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/lib-dynload',\n",
" '/home/wpurwant/.local/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages/IPython/extensions',\n",
" '/home/wpurwant/.ipython',\n",
" '/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/current/init']"
]
},
"execution_count": 12,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"import sys\n",
"sys.path"
]
},
{
"cell_type": "code",
"execution_count": 13,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 14,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"<function env_modules_python.module(command, *arguments)>"
]
},
"execution_count": 14,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"module"
]
},
{
"cell_type": "code",
"execution_count": 15,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"Currently Loaded Modules:\n",
" 1) python/3.7.3 5) py-jinja2/2.10 9) py-jupyter/1.1.4\n",
" 2) py-markupsafe/1.0 6) py-six/1.12.0 10) texlive/2020\n",
" 3) py-pytz/2018.4 7) intel-mkl/2019.4.243\n",
" 4) py-babel/2.6.0 8) py-numpy/1.16.3\n",
"\n",
" \n",
"\n",
"\n"
]
}
],
"source": [
"module(\"list\")"
]
},
{
"cell_type": "code",
"execution_count": 16,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 17,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"The following have been reloaded with a version change:\n",
" 1) py-pytz/2018.4 => py-pytz/2019.3\n",
"\n",
"\n"
]
}
],
"source": [
"module(\"load\", \"py-pandas\")"
]
},
{
"cell_type": "code",
"execution_count": 18,
"metadata": {},
"outputs": [],
"source": [
"import numpy"
]
},
{
"cell_type": "code",
"execution_count": 19,
"metadata": {},
"outputs": [
{
"ename": "ModuleNotFoundError",
"evalue": "No module named 'pandas'",
"output_type": "error",
"traceback": [
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
"\u001b[0;31mModuleNotFoundError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m<ipython-input-19-38d4b0363d82>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0;32mimport\u001b[0m \u001b[0mpandas\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
"\u001b[0;31mModuleNotFoundError\u001b[0m: No module named 'pandas'"
]
}
],
"source": [
"import pandas"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## ERROR!\n",
"\n",
"The running python cannot find pandas."
]
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.7.3"
}
},
"nbformat": 4,
"nbformat_minor": 2
}

513
lmod/ipython/startup/testbeds/debug_ipython_start_5.ipynb
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{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"# Examine & fix jupyter / ipython start file\n",
"\n",
"Date: 2020-06-09\n",
"\n",
"Purpose: Try to examine the outcome of *my* fix to `~/.ipython/profile_default/startup/000-odurc-lmod.py` + the handmade \"module\" command (mine: `lmod_python_fix1.py`).\n",
"\n",
"Test-3: restarted the entire Jupyter stuff.\n"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"outputs": [],
"source": [
"import sys,os"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/scripts/init',\n",
" '',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python37.zip',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/lib-dynload',\n",
" '/home/wpurwant/.local/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages/IPython/extensions',\n",
" '/home/wpurwant/.ipython',\n",
" '/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/current/init']"
]
},
"execution_count": 2,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"sys.path"
]
},
{
"cell_type": "code",
"execution_count": 4,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/shared/apps/common/lmod/scripts/init:/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages:/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages:/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages:/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages:/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages:/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib/python3.7/site-packages:/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages'"
]
},
"execution_count": 4,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"os.environ['PYTHONPATH']"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"<function lmod_python_fix3.module(command, *arguments)>"
]
},
"execution_count": 6,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"module"
]
},
{
"cell_type": "code",
"execution_count": 7,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start/lmod_python_fix3.py'"
]
},
"execution_count": 7,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"module.__code__.co_filename"
]
},
{
"cell_type": "code",
"execution_count": 8,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'/tmp/tmp.JtRbow9G3w'"
]
},
"execution_count": 8,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"import os\n",
"\n",
"xlibpath = os.environ.get(\"LMOD_MANUAL_LD_LIBRARY_PATH\")\n",
"xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 10,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['/shared/apps/common/lmod/scripts/init',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages']"
]
},
"execution_count": 10,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"os.environ['PYTHONPATH'].split(\":\")"
]
},
{
"cell_type": "code",
"execution_count": 11,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 0\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 12,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"Currently Loaded Modules:\n",
" 1) python/3.7.3 5) py-jinja2/2.10 9) py-jupyter/1.1.4\n",
" 2) py-markupsafe/1.0 6) py-six/1.12.0 10) texlive/2020\n",
" 3) py-pytz/2018.4 7) intel-mkl/2019.4.243\n",
" 4) py-babel/2.6.0 8) py-numpy/1.16.3\n",
"\n",
" \n",
"\n",
"\n"
]
}
],
"source": [
"module(\"list\")"
]
},
{
"cell_type": "code",
"execution_count": 13,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 172\r\n",
"lrwxrwxrwx 1 wpurwant users 131 Jun 9 19:58 \u001b[0m\u001b[01;36mlibiomp5.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin/libiomp5.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 134 Jun 9 19:58 \u001b[01;36mlibiomp5_db.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin/libiomp5_db.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 136 Jun 9 19:58 \u001b[01;36mlibiompstubs5.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin/libiompstubs5.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 128 Jun 9 19:58 \u001b[01;36mlibmkl_avx.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 129 Jun 9 19:58 \u001b[01;36mlibmkl_avx2.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx2.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 131 Jun 9 19:58 \u001b[01;36mlibmkl_avx512.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx512.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:58 \u001b[01;36mlibmkl_avx512_mic.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx512_mic.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 145 Jun 9 19:58 \u001b[01;36mlibmkl_blacs_intelmpi_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_intelmpi_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 144 Jun 9 19:58 \u001b[01;36mlibmkl_blacs_intelmpi_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_intelmpi_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 144 Jun 9 19:58 \u001b[01;36mlibmkl_blacs_openmpi_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_openmpi_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 143 Jun 9 19:58 \u001b[01;36mlibmkl_blacs_openmpi_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_openmpi_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 143 Jun 9 19:58 \u001b[01;36mlibmkl_blacs_sgimpt_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_sgimpt_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 142 Jun 9 19:58 \u001b[01;36mlibmkl_blacs_sgimpt_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_sgimpt_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 134 Jun 9 19:58 \u001b[01;36mlibmkl_cdft_core.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_cdft_core.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 129 Jun 9 19:58 \u001b[01;36mlibmkl_core.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_core.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 128 Jun 9 19:58 \u001b[01;36mlibmkl_def.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_def.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:58 \u001b[01;36mlibmkl_gf_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_gf_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:58 \u001b[01;36mlibmkl_gf_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:58 \u001b[01;36mlibmkl_gnu_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_gnu_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 136 Jun 9 19:58 \u001b[01;36mlibmkl_intel_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_intel_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:58 \u001b[01;36mlibmkl_intel_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_intel_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 137 Jun 9 19:58 \u001b[01;36mlibmkl_intel_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_intel_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 127 Jun 9 19:58 \u001b[01;36mlibmkl_mc.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_mc.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 128 Jun 9 19:58 \u001b[01;36mlibmkl_mc3.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_mc3.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:58 \u001b[01;36mlibmkl_pgi_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_pgi_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 127 Jun 9 19:58 \u001b[01;36mlibmkl_rt.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_rt.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 140 Jun 9 19:58 \u001b[01;36mlibmkl_scalapack_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_scalapack_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 139 Jun 9 19:58 \u001b[01;36mlibmkl_scalapack_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_scalapack_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:58 \u001b[01;36mlibmkl_sequential.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_sequential.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:58 \u001b[01;36mlibmkl_tbb_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_tbb_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:58 \u001b[01;36mlibmkl_vml_avx.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:58 \u001b[01;36mlibmkl_vml_avx2.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx2.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:58 \u001b[01;36mlibmkl_vml_avx512.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx512.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 139 Jun 9 19:58 \u001b[01;36mlibmkl_vml_avx512_mic.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx512_mic.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:58 \u001b[01;36mlibmkl_vml_cmpt.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_cmpt.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:58 \u001b[01;36mlibmkl_vml_def.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_def.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 131 Jun 9 19:58 \u001b[01;36mlibmkl_vml_mc.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_mc.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:58 \u001b[01;36mlibmkl_vml_mc2.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_mc2.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:58 \u001b[01;36mlibmkl_vml_mc3.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_mc3.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 58 Jun 9 19:58 \u001b[01;36mlibpython3.7m.so\u001b[0m -> \u001b[01;32m/shared/apps/common/python/3.7.3-wqal/lib/libpython3.7m.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 62 Jun 9 19:58 \u001b[01;36mlibpython3.7m.so.1.0\u001b[0m -> \u001b[01;32m/shared/apps/common/python/3.7.3-wqal/lib/libpython3.7m.so.1.0\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 55 Jun 9 19:58 \u001b[01;36mlibpython3.so\u001b[0m -> \u001b[01;32m/shared/apps/common/python/3.7.3-wqal/lib/libpython3.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:58 \u001b[01;36mlibtbb.so.2\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7/libtbb.so.2\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 139 Jun 9 19:58 \u001b[01;36mlibtbbmalloc.so.2\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7/libtbbmalloc.so.2\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 145 Jun 9 19:58 \u001b[01;36mlibtbbmalloc_proxy.so.2\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7/libtbbmalloc_proxy.so.2\u001b[0m\u001b[K*\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 14,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"The following have been reloaded with a version change:\n",
" 1) py-pytz/2018.4 => py-pytz/2019.3\n",
"\n",
"\n"
]
}
],
"source": [
"module(\"load\", \"py-pandas\")"
]
},
{
"cell_type": "code",
"execution_count": 15,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['/shared/apps/auto/py-pandas/0.25.1-gcc-7.3.0-wzvo/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-bottleneck/1.2.1-gcc-7.3.0-ll6r/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numexpr/2.7.0-gcc-7.3.0-n2j5/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pytz/2019.3-gcc-7.3.0-hfjj/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-python-dateutil/2.8.0-gcc-7.3.0-rskl/lib/python3.7/site-packages',\n",
" '/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/scripts/init',\n",
" '',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python37.zip',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/lib-dynload',\n",
" '/home/wpurwant/.local/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages/IPython/extensions',\n",
" '/home/wpurwant/.ipython',\n",
" '/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/current/init']"
]
},
"execution_count": 15,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"sys.path"
]
},
{
"cell_type": "code",
"execution_count": 16,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n",
"The following have been reloaded with a version change:\n",
" 1) py-numexpr/2.7.0 => py-numexpr/2.6.9 3) py-pytz/2019.3 => py-pytz/2018.4\n",
" 2) py-pandas/0.25.1 => py-pandas/0.24.1\n",
"\n",
"\n"
]
}
],
"source": [
"module(\"load\", \"py-seaborn\")"
]
},
{
"cell_type": "code",
"execution_count": 17,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['/shared/apps/auto/py-seaborn/0.9.0-gcc-7.3.0-kwbn/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-matplotlib/3.0.2-gcc-7.3.0-ul7n/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-setuptools/41.0.1-gcc-7.3.0-rpco/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-kiwisolver/1.0.1-gcc-7.3.0-umal/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-cycler/0.10.0-gcc-7.3.0-jzfb/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pillow/5.4.1-gcc-7.3.0-ycr3/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pyparsing/2.3.1-gcc-7.3.0-xshz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pandas/0.24.1-gcc-7.3.0-yx6e/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-pytz/2018.4-gcc-7.3.0-wqdr/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numexpr/2.6.9-gcc-7.3.0-3kcy/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-scipy/1.3.0-gcc-7.3.0-eyvd/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-bottleneck/1.2.1-gcc-7.3.0-ll6r/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-python-dateutil/2.8.0-gcc-7.3.0-rskl/lib/python3.7/site-packages',\n",
" '/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/scripts/init',\n",
" '',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-numpy/1.16.3-gcc-7.3.0-mdow/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-six/1.12.0-gcc-7.3.0-ay7a/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jinja2/2.10-gcc-7.3.0-usre/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-babel/2.6.0-gcc-7.3.0-be4y/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-markupsafe/1.0-gcc-7.3.0-biyo/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python37.zip',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/lib-dynload',\n",
" '/home/wpurwant/.local/lib/python3.7/site-packages',\n",
" '/shared/apps/common/python/3.7.3-wqal/lib/python3.7/site-packages',\n",
" '/shared/apps/auto/py-jupyter/1.1.4-gcc-7.3.0-cxdz/lib/python3.7/site-packages/IPython/extensions',\n",
" '/home/wpurwant/.ipython',\n",
" '/home/wpurwant/Testbeds/jupyter/wahab_jupyter_start',\n",
" '/shared/apps/common/lmod/current/init']"
]
},
"execution_count": 17,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"sys.path"
]
},
{
"cell_type": "code",
"execution_count": 11,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"total 172\r\n",
"lrwxrwxrwx 1 wpurwant users 131 Jun 9 19:04 \u001b[0m\u001b[01;36mlibiomp5.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin/libiomp5.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 134 Jun 9 19:04 \u001b[01;36mlibiomp5_db.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin/libiomp5_db.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 136 Jun 9 19:04 \u001b[01;36mlibiompstubs5.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin/libiompstubs5.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 128 Jun 9 19:04 \u001b[01;36mlibmkl_avx.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 129 Jun 9 19:04 \u001b[01;36mlibmkl_avx2.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx2.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 131 Jun 9 19:04 \u001b[01;36mlibmkl_avx512.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx512.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_avx512_mic.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_avx512_mic.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 145 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_intelmpi_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_intelmpi_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 144 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_intelmpi_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_intelmpi_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 144 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_openmpi_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_openmpi_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 143 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_openmpi_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_openmpi_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 143 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_sgimpt_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_sgimpt_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 142 Jun 9 19:04 \u001b[01;36mlibmkl_blacs_sgimpt_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_blacs_sgimpt_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 134 Jun 9 19:04 \u001b[01;36mlibmkl_cdft_core.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_cdft_core.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 129 Jun 9 19:04 \u001b[01;36mlibmkl_core.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_core.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 128 Jun 9 19:04 \u001b[01;36mlibmkl_def.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_def.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:04 \u001b[01;36mlibmkl_gf_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_gf_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:04 \u001b[01;36mlibmkl_gf_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_gnu_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_gnu_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 136 Jun 9 19:04 \u001b[01;36mlibmkl_intel_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_intel_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_intel_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_intel_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 137 Jun 9 19:04 \u001b[01;36mlibmkl_intel_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_intel_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 127 Jun 9 19:04 \u001b[01;36mlibmkl_mc.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_mc.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 128 Jun 9 19:04 \u001b[01;36mlibmkl_mc3.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_mc3.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_pgi_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_pgi_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 127 Jun 9 19:04 \u001b[01;36mlibmkl_rt.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_rt.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 140 Jun 9 19:04 \u001b[01;36mlibmkl_scalapack_ilp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_scalapack_ilp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 139 Jun 9 19:04 \u001b[01;36mlibmkl_scalapack_lp64.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_scalapack_lp64.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_sequential.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_sequential.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_tbb_thread.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_tbb_thread.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:04 \u001b[01;36mlibmkl_vml_avx.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:04 \u001b[01;36mlibmkl_vml_avx2.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx2.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 135 Jun 9 19:04 \u001b[01;36mlibmkl_vml_avx512.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx512.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 139 Jun 9 19:04 \u001b[01;36mlibmkl_vml_avx512_mic.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_avx512_mic.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:04 \u001b[01;36mlibmkl_vml_cmpt.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_cmpt.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:04 \u001b[01;36mlibmkl_vml_def.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_def.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 131 Jun 9 19:04 \u001b[01;36mlibmkl_vml_mc.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_mc.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:04 \u001b[01;36mlibmkl_vml_mc2.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_mc2.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 132 Jun 9 19:04 \u001b[01;36mlibmkl_vml_mc3.so\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/libmkl_vml_mc3.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 58 Jun 9 19:04 \u001b[01;36mlibpython3.7m.so\u001b[0m -> \u001b[01;32m/shared/apps/common/python/3.7.3-wqal/lib/libpython3.7m.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 62 Jun 9 19:04 \u001b[01;36mlibpython3.7m.so.1.0\u001b[0m -> \u001b[01;32m/shared/apps/common/python/3.7.3-wqal/lib/libpython3.7m.so.1.0\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 55 Jun 9 19:04 \u001b[01;36mlibpython3.so\u001b[0m -> \u001b[01;32m/shared/apps/common/python/3.7.3-wqal/lib/libpython3.so\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 133 Jun 9 19:04 \u001b[01;36mlibtbb.so.2\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7/libtbb.so.2\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 139 Jun 9 19:04 \u001b[01;36mlibtbbmalloc.so.2\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7/libtbbmalloc.so.2\u001b[0m\u001b[K*\r\n",
"lrwxrwxrwx 1 wpurwant users 145 Jun 9 19:04 \u001b[01;36mlibtbbmalloc_proxy.so.2\u001b[0m -> \u001b[01;32m/shared/apps/auto/intel-mkl/2019.4.243-gcc-7.3.0-ntiu/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7/libtbbmalloc_proxy.so.2\u001b[0m\u001b[K*\r\n"
]
}
],
"source": [
"ls -l $xlibpath"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [],
"source": [
"import numpy"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.7.3"
}
},
"nbformat": 4,
"nbformat_minor": 2
}
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